The ORFeome Collaboration is successful due to the efforts of the following collaborators:
Dana Farber Cancer Institute - Center for Cancer Systems Biology
Reference: Lamesch, P., Li, N, Milstein, S et al. (2006) A Resource of Human Open Reading Frames Covering over 10,000 Human Genes
In preparation
DKFZ German Cancer Research Center
Reference: Wiemann, S., Arlt, D., Huber, W., Wellenreuther, R., Schleeger, S., Mehrle, A., Bechtel, S., Sauermann, M., Korf, U., Pepperkok, R., Sultmann, H., Poustka, A. (2004) From ORFeome to Biology: A Functional Genomics Pipeline. Genome Res 14, 2136-44
Reference: Bannasch, D., Mehrle, A., Glatting, K.-H., Pepperkok, R., Poustka, A. and Wiemann, S. (2004). LIFEdb: A database for functional genomics experiments integrating information from external sources, and serving as a sample tracking system. Nucleic Acids Res 32, D505-508
Source BioScience Geneservice™
Virginia G. Piper Center for Personalized Diagnostics at Biodesign Institute of Arizona State University
Reference: Rolfs A, Hu Y, Ebert L, Hoffmann D, Zuo D, Ramachandran N, Raphael J, Kelley F, McCarron S, Jepson DA, Shen B, Baqui MM, Pearlberg J, Taycher E, DeLoughery C, Hoerlein A, Korn B, LaBaer J. (2008) A biomedically enriched collection of 7000 human ORF clones. PLoS One. 2008 Jan 30;3(1):e1528.
DNA Resource Core at Harvard Medical School
Reference: Rolfs A, Hu Y, Ebert L, Hoffmann D, Zuo D, Ramachandran N, Raphael J, Kelley F, McCarron S, Jepson DA, Shen B, Baqui MM, Pearlberg J, Taycher E, DeLoughery C, Hoerlein A, Korn B, LaBaer J. (2008) A biomedically enriched collection of 7000 human ORF clones. PLoS One. 2008 Jan 30;3(1):e1528.
I.M.A.G.E Consortium -- Hudson Alpha Institute for Biotechnology
Reference: Lennon, G.G., Auffray, C., Polymeropoulos, M., Soares, M.B. (1996) The I.M.A.G.E. Consortium: An Integrated Molecular Analysis of Genomes and their Expression. Genomics 33:151-152
Kazusa DNA Research Institute
Reference: Preparation of a set of expression-ready clones of mammalian long cDNA
encoding large proteins by the ORF Trap Cloning method. (2006) DNA Res. 12, 257-267
Reference: Takahiro Nagase, Hisashi Yamakawa, Shinichi Tadokoro, Daisuke Nakajima,
Shinichi Inoue, Kei Yamaguchi, Yasuhide Itokawa, Reiko F. Kikuno, Hisashi Koga, and Osamu Ohara
(2008). Exploration of Human ORFeome: High-Throughput Preparation of ORF Clones and Efficient
Characterization of Their Protein Products. DNA Res. 15: 137 -149
Mammalian Gene Collection
Reference: Generation and initial analysis of more than 15,000 full-length human and
mouse cDNA sequences. (2002) PNAS99(26):16899-903
Reference: The status, quality, and expansion of the NIH full-length cDNA project:
the Mammalian Gene Collection (MGC). (2004) Genome Research 14:2121-7
RIKEN Yokohama Institute
RIKEN Genomic Sciences Center
DNAFORM
Wellcome Trust Sanger Institute
Experimental Gene Annotation Group
HAVANA group
Chromosome 22 ORF cloning project
Reference: A genome annotation-driven approach to cloning the human ORFeome.
(2004) Genome Biology 5:R84 doi:10.1186/gb-2004-5-10-r84
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